util/pbs/send.py:
- add a -d to set the job root directory allowing one to run
send.py from anywhere.
- specify full paths to files instead of relative paths to make -d
work and to allow ssh qsub to work again.
- make the Link directory only copy links that point to regular files.
--HG--
extra : convert_revision : dd330cee08b97c5d72c3d58ef123f83ac7ccede7
Fix up configuration scrupts to have better support for
running on the simulation pool.
--HG--
extra : convert_revision : 0178c8600b193d6c0ca69163fb735a7fa0e70782