/*************************************************************************/ /* */ /* Copyright (c) 1994 Stanford University */ /* */ /* All rights reserved. */ /* */ /* Permission is given to use, copy, and modify this software for any */ /* non-commercial purpose as long as this copyright notice is not */ /* removed. All other uses, including redistribution in whole or in */ /* part, are forbidden without prior written permission. */ /* */ /* This software is provided with absolutely no warranty and no */ /* support. */ /* */ /*************************************************************************/ EXTERN_ENV #include "stdio.h" #include "parameters.h" #include "mdvar.h" #include "water.h" #include "wwpot.h" #include "cnst.h" #include "mddata.h" #include "fileio.h" #include "split.h" #include "global.h" /************************************************************************/ /* routine that implements the time-steps. Called by main routine and calls others */ double MDMAIN(long NSTEP, long NPRINT, long NSAVE, long NORD1, long ProcID) { double XTT; long i; double POTA,POTR,POTRF; double XVIR,AVGT,TEN; double TTMV = 0.0, TKIN = 0.0, TVIR = 0.0; /*.......ESTIMATE ACCELERATION FROM F/M */ INTRAF(&gl->VIR,ProcID); BARRIER(gl->start, NumProcs); INTERF(ACC,&gl->VIR,ProcID); BARRIER(gl->start, NumProcs); /* MOLECULAR DYNAMICS LOOP OVER ALL TIME-STEPS */ for (i=1;i <= NSTEP; i++) { TTMV=TTMV+1.00; /* reset simulator stats at beginning of second time-step */ /* POSSIBLE ENHANCEMENT: Here's where one start measurements to avoid cold-start effects. Recommended to do this at the beginning of the second timestep; i.e. if (i == 2). */ /* initialize various shared sums */ if (ProcID == 0) { long dir; if (i >= 2) { CLOCK(gl->trackstart); } gl->VIR = 0.0; gl->POTA = 0.0; gl->POTR = 0.0; gl->POTRF = 0.0; for (dir = XDIR; dir <= ZDIR; dir++) gl->SUM[dir] = 0.0; } if ((ProcID == 0) && (i >= 2)) { CLOCK(gl->intrastart); } BARRIER(gl->start, NumProcs); PREDIC(TLC,NORD1,ProcID); INTRAF(&gl->VIR,ProcID); BARRIER(gl->start, NumProcs); if ((ProcID == 0) && (i >= 2)) { CLOCK(gl->intraend); gl->intratime += gl->intraend - gl->intrastart; } if ((ProcID == 0) && (i >= 2)) { CLOCK(gl->interstart); } INTERF(FORCES,&gl->VIR,ProcID); if ((ProcID == 0) && (i >= 2)) { CLOCK(gl->interend); gl->intertime += gl->interend - gl->interstart; } if ((ProcID == 0) && (i >= 2)) { CLOCK(gl->intrastart); } CORREC(PCC,NORD1,ProcID); BNDRY(ProcID); KINETI(gl->SUM,HMAS,OMAS,ProcID); BARRIER(gl->start, NumProcs); if ((ProcID == 0) && (i >= 2)) { CLOCK(gl->intraend); gl->intratime += gl->intraend - gl->intrastart; } TKIN=TKIN+gl->SUM[0]+gl->SUM[1]+gl->SUM[2]; TVIR=TVIR-gl->VIR; /* check if potential energy is to be computed, and if printing and/or saving is to be done, this time step. Note that potential energy is computed once every NPRINT time-steps */ if (((i % NPRINT) == 0) || ( (NSAVE > 0) && ((i % NSAVE) == 0))){ if ((ProcID == 0) && (i >= 2)) { CLOCK(gl->interstart); } /* call potential energy computing routine */ POTENG(&gl->POTA,&gl->POTR,&gl->POTRF,ProcID); BARRIER(gl->start, NumProcs); if ((ProcID == 0) && (i >= 2)) { CLOCK(gl->interend); gl->intertime += gl->interend - gl->interstart; } POTA=gl->POTA*FPOT; POTR=gl->POTR*FPOT; POTRF=gl->POTRF*FPOT; /* compute some values to print */ XVIR=TVIR*FPOT*0.50/TTMV; AVGT=TKIN*FKIN*TEMP*2.00/(3.00*TTMV); TEN=(gl->SUM[0]+gl->SUM[1]+gl->SUM[2])*FKIN; XTT=POTA+POTR+POTRF+TEN; if ((i % NPRINT) == 0 && ProcID == 0) { fprintf(six," %5ld %14.5lf %12.5lf %12.5lf \ %12.5lf\n %16.3lf %16.5lf %16.5lf\n", i,TEN,POTA,POTR,POTRF,XTT,AVGT,XVIR); } } /* wait for everyone to finish time-step */ BARRIER(gl->start, NumProcs); if ((ProcID == 0) && (i >= 2)) { CLOCK(gl->trackend); gl->tracktime += gl->trackend - gl->trackstart; } } /* for i */ return(XTT); } /* end of subroutine MDMAIN */