This was done with an automated process, so there could be things that were
done in this tree in the past that didn't make it. One known regression
is that atomic memory operations do not seem to work properly anymore.
1. removed checks from tester files
2. removed else clause in Sequencer and DirectoryMemory else clause is
needed by the tester, it is up to Derek to revive it elsewhere when he
gets to it
Also:
1. Changed m_entries in DirectoryMemory to a map
2. And replaced SIMICS_read_physical_memory with a call to now-dummy
Derek's-to-be readPhysMem function
This basically means changing all #include statements and changing
autogenerated code so that it generates the correct paths. Because
slicc generates #includes, I had to hard code the include paths to
mem/protocol.